Collect

Stool. Collect in a stool container. 1.0-5.0 mL for fresh stool; 10.0 mL stool in Cary-Blair or Enteric Plus transport media.

Unacceptable Conditions

Leaking container, multiple specimens (> 1 per inpatient stay or collected greater than 5 days after admission), delayed transport to lab without use of appropriate preservative, transport other than Cary-Blair or Enteric Plus.  Stool contaminated with urine.  Diapers are not acceptable.

 

Storage/Transport Temperature

Transport unpreserved stool at room temperature to lab within 2 hours of collection. If transport delayed greater than 2 hours, preserve in enteric transport media, Para-Pak Enteric Plus, or Cary Blair equivalent. Stable in transport media at room temperature or refrigerated for up to 4 days.

 

Stability (from collection to initiation)

Once in transport media, stable at room temperature or refrigerated up to 4 days.

Performed

Microbiology.  Daily per shift.  Results within shift; during peak seasons or outbreaks within 24 hours.

Remarks

If Aeromonas species is suspected, order Culture, Aeromonas (ARMCU).  GI Panel does not include Aeromonas.

If Norovirus or Adenovirus is specifically desired, please order Norwalk Virus Detection (NVDET) or Adenovirus DNA Detection, specimens other than blood (ADVOT), respectively.

 

Notes

For inpatient testing, the GI Pathogen Panel cannot be ordered if it is a repeat test OR the patient has been hospitalized for > 72 hours.  To get approval outside of these guidelines, please page Microbiology at 402-888-5626.

Patients being tested for GI pathogens should be placed in Contact Isolation until infection is resolved or a negative lab result is received.

 

Ordering Recommendations

Ordering individual tests available on the panel are considered duplicate testing and not recommended.  Multiple specimens for testing is not recommended and unacceptable.  This test replaces routine Stool Culture, Yersinia Culture, Vibrio Culture, and Ova & Parasite antigen screening for Giardia and Cryptospodium.

If the Clostridium difficile target is detected, the Clostridium difficile toxin order (CDTXAG) is automatically reflexed.

Performed

Microbiology.  Daily per shift.  Results within shift; during peak seasons or outbreaks within 24 hours.

Methodology

Film Array mutiplexed PCR

Reported

Positive results reported as soon as detected.  Results within shift; during peak season or outbreaks within 24 hours.

Reference Interval

Not Detected

Interpretive Data

Targets tested in panel are listed below:

Campylobacter species (C. jejuni/C. coli/C. upsaliensis) - if detected, a culture is automatically reflexed for recovery and susceptibility testing,

Clostridium difficile - If detected, the Clostridium difficile toxin order (CDTXAG) is automatically reflexed

Plesiomonas shigelloides

Salmonella species

Vibrio species    (V. parahaemolyticus/V. vulnificus/V. cholerae)

Vibrio cholerae  (Species identification)

Yersinia enterocolitica

Enteroaggregative E. coli (EAEC)

Enteropathogenic E. coli (EPEC)

Enterotoxigenic E. coli (ETEC) lt/st

Shiga-like producing E. coli (STEC) stx1/stx2

E. coli O157  (specific identification from STEC)

Shigella/Enteroinvasive E. coli (EIEC) - if detected, a culture is automatically reflexed for recovery and susceptibility testing,

Cryptosporidium species

Cyclospora cayetanensis

Entamoeba histolytica

Giardia lamblia   (also known as G. intestinalis and G. duodenalis)

Adenovirus F 40/41

Astrovirus

Norovirus GI/GII

Rotavirus A

Sapovirus   (Genogroups I, II, IV, and V)

CPT Codes

87507
87324
87449


**CPT code is subject to limited coverage policies for many payers and may require an ABN or Patient Consent for Non-Covered Laboratory Services when ordering.  UHC requires prior authorization (reference code:  GIP).

Medicare Policy

Test Build Information

OrderCodeOrderNameResultCodeResultNameResultUnitsLOINCCPT
GIPGI PATH PANEL PCRCMPYCAMPYLOBACTER SP. 82196-787507
GIPGI PATH PANEL PCRPLESIPLESIOMONAS SP. 82198-3 
GIPGI PATH PANEL PCRSLMSPSALMONELLA SPECIES 82199-1 
GIPGI PATH PANEL PCRVBRSPVIBRIO SPECIES 82200-7 
GIPGI PATH PANEL PCRVBRCVIBRIO CHOLERAE 82201-5 
GIPGI PATH PANEL PCRYRSEY. ENTEROCOLITICA 82202-3 
GIPGI PATH PANEL PCREAECE. COLI (EAEC) 80349-4 
GIPGI PATH PANEL PCREPECE. COLI (EPEC) 80348-6 
GIPGI PATH PANEL PCRETECE. COLI (ETEC) 80351-0 
GIPGI PATH PANEL PCRSTECE. COLI (STEC) 82203-1 
GIPGI PATH PANEL PCRECO157E. COLI O157 82204-9 
GIPGI PATH PANEL PCREIECSHIGELLA AND EIEC 80350-2 
GIPGI PATH PANEL PCRCRYPTOCRYPTOSPORIDIUM 82205-6 
GIPGI PATH PANEL PCRCAYECYCLO. CAYETANENSIS 82206-4 
GIPGI PATH PANEL PCREHISTOENTA. HISTOLYTICA 82207-2 
GIPGI PATH PANEL PCRGLAMBGIARDIA LAMBLIA 82208-0 
GIPGI PATH PANEL PCRADNVFADENOVIRUS F 40/41 82209-8 
GIPGI PATH PANEL PCRASTRVASTROVIRUS 82210-6 
GIPGI PATH PANEL PCRNOROVNOROVIRUS GI/GII 82211-4 
GIPGI PATH PANEL PCRROTVAROTAVIRUS A 82212-2 
GIPGI PATH PANEL PCRSAPOSAPOVIRUS 82213-0 
GIPGI PATH PANEL PCRGIPCOMCOMMENT   

Reflex testing:
CDTXAGC.DIFF AG AND TOXINCDIFAGC DIFFICILE ANTIGEN 57901-187324, 87449
CDTXAGC.DIFF AG AND TOXINCDIFTXC DIFFICILE TOXIN 34713-8 
CDTXAGC.DIFF AG AND TOXINCDIFCMC DIFFICILE COMMENT   

Additional Information

For additional information or questions, contact RPSInterfaceSupport@unmc.edu
 
Collection

Collect

Stool. Collect in a stool container. 1.0-5.0 mL for fresh stool; 10.0 mL stool in Cary-Blair or Enteric Plus transport media.

Unacceptable Conditions

Leaking container, multiple specimens (> 1 per inpatient stay or collected greater than 5 days after admission), delayed transport to lab without use of appropriate preservative, transport other than Cary-Blair or Enteric Plus.  Stool contaminated with urine.  Diapers are not acceptable.

 

Storage/Transport Temperature

Transport unpreserved stool at room temperature to lab within 2 hours of collection. If transport delayed greater than 2 hours, preserve in enteric transport media, Para-Pak Enteric Plus, or Cary Blair equivalent. Stable in transport media at room temperature or refrigerated for up to 4 days.

 

Stability (from collection to initiation)

Once in transport media, stable at room temperature or refrigerated up to 4 days.

Performed

Microbiology.  Daily per shift.  Results within shift; during peak seasons or outbreaks within 24 hours.

Remarks

If Aeromonas species is suspected, order Culture, Aeromonas (ARMCU).  GI Panel does not include Aeromonas.

If Norovirus or Adenovirus is specifically desired, please order Norwalk Virus Detection (NVDET) or Adenovirus DNA Detection, specimens other than blood (ADVOT), respectively.

 

Notes

For inpatient testing, the GI Pathogen Panel cannot be ordered if it is a repeat test OR the patient has been hospitalized for > 72 hours.  To get approval outside of these guidelines, please page Microbiology at 402-888-5626.

Patients being tested for GI pathogens should be placed in Contact Isolation until infection is resolved or a negative lab result is received.

 
Ordering

Ordering Recommendations

Ordering individual tests available on the panel are considered duplicate testing and not recommended.  Multiple specimens for testing is not recommended and unacceptable.  This test replaces routine Stool Culture, Yersinia Culture, Vibrio Culture, and Ova & Parasite antigen screening for Giardia and Cryptospodium.

If the Clostridium difficile target is detected, the Clostridium difficile toxin order (CDTXAG) is automatically reflexed.

Performed

Microbiology.  Daily per shift.  Results within shift; during peak seasons or outbreaks within 24 hours.

Methodology

Film Array mutiplexed PCR

Reported

Positive results reported as soon as detected.  Results within shift; during peak season or outbreaks within 24 hours.

Result Interpretation

Reference Interval

Not Detected

Interpretive Data

Targets tested in panel are listed below:

Campylobacter species (C. jejuni/C. coli/C. upsaliensis) - if detected, a culture is automatically reflexed for recovery and susceptibility testing,

Clostridium difficile - If detected, the Clostridium difficile toxin order (CDTXAG) is automatically reflexed

Plesiomonas shigelloides

Salmonella species

Vibrio species    (V. parahaemolyticus/V. vulnificus/V. cholerae)

Vibrio cholerae  (Species identification)

Yersinia enterocolitica

Enteroaggregative E. coli (EAEC)

Enteropathogenic E. coli (EPEC)

Enterotoxigenic E. coli (ETEC) lt/st

Shiga-like producing E. coli (STEC) stx1/stx2

E. coli O157  (specific identification from STEC)

Shigella/Enteroinvasive E. coli (EIEC) - if detected, a culture is automatically reflexed for recovery and susceptibility testing,

Cryptosporidium species

Cyclospora cayetanensis

Entamoeba histolytica

Giardia lamblia   (also known as G. intestinalis and G. duodenalis)

Adenovirus F 40/41

Astrovirus

Norovirus GI/GII

Rotavirus A

Sapovirus   (Genogroups I, II, IV, and V)

Administrative

CPT Codes

87507
87324
87449


**CPT code is subject to limited coverage policies for many payers and may require an ABN or Patient Consent for Non-Covered Laboratory Services when ordering.  UHC requires prior authorization (reference code:  GIP).

Medicare Policy
RPS Interface Information

Test Build Information

OrderCodeOrderNameResultCodeResultNameResultUnitsLOINCCPT
GIPGI PATH PANEL PCRCMPYCAMPYLOBACTER SP. 82196-787507
GIPGI PATH PANEL PCRPLESIPLESIOMONAS SP. 82198-3 
GIPGI PATH PANEL PCRSLMSPSALMONELLA SPECIES 82199-1 
GIPGI PATH PANEL PCRVBRSPVIBRIO SPECIES 82200-7 
GIPGI PATH PANEL PCRVBRCVIBRIO CHOLERAE 82201-5 
GIPGI PATH PANEL PCRYRSEY. ENTEROCOLITICA 82202-3 
GIPGI PATH PANEL PCREAECE. COLI (EAEC) 80349-4 
GIPGI PATH PANEL PCREPECE. COLI (EPEC) 80348-6 
GIPGI PATH PANEL PCRETECE. COLI (ETEC) 80351-0 
GIPGI PATH PANEL PCRSTECE. COLI (STEC) 82203-1 
GIPGI PATH PANEL PCRECO157E. COLI O157 82204-9 
GIPGI PATH PANEL PCREIECSHIGELLA AND EIEC 80350-2 
GIPGI PATH PANEL PCRCRYPTOCRYPTOSPORIDIUM 82205-6 
GIPGI PATH PANEL PCRCAYECYCLO. CAYETANENSIS 82206-4 
GIPGI PATH PANEL PCREHISTOENTA. HISTOLYTICA 82207-2 
GIPGI PATH PANEL PCRGLAMBGIARDIA LAMBLIA 82208-0 
GIPGI PATH PANEL PCRADNVFADENOVIRUS F 40/41 82209-8 
GIPGI PATH PANEL PCRASTRVASTROVIRUS 82210-6 
GIPGI PATH PANEL PCRNOROVNOROVIRUS GI/GII 82211-4 
GIPGI PATH PANEL PCRROTVAROTAVIRUS A 82212-2 
GIPGI PATH PANEL PCRSAPOSAPOVIRUS 82213-0 
GIPGI PATH PANEL PCRGIPCOMCOMMENT   

Reflex testing:
CDTXAGC.DIFF AG AND TOXINCDIFAGC DIFFICILE ANTIGEN 57901-187324, 87449
CDTXAGC.DIFF AG AND TOXINCDIFTXC DIFFICILE TOXIN 34713-8 
CDTXAGC.DIFF AG AND TOXINCDIFCMC DIFFICILE COMMENT   

Additional Information

For additional information or questions, contact RPSInterfaceSupport@unmc.edu