Other Related Information

HCV Quant with Reflex to HCV Genotype

Additional Tests Included

Includes required HCV Quantitative Viral Load

Ordering Recommendations

HCV GENO is an order that includes both required HCV Quantification and HCV Genotyping. Order only HCV GENO. DO NOT order an additional HCV QNT.

Collection Container

Pearl top (SST), or other ARUP suggested tubes: Lavender (EDTA), pink (K2EDTA), plasma preparation tube (PPT), or serum separator tube (SST).

Collect

5 ml of blood in K2EDTA pearl white top tube

Pediatric Collection

Approval required from Molecular Pathologist for Pediatric Testing; contact the Molecular Laboratory at 215-615-3094 to arrange testing.

Specimen Preparation

Send specimen to lab within 24 hours of collection.  Do not spin.

Storage/Transport Temperature

Room temperature or refrigerated

Stability (from collection to initiation)

Stable at room temperature for 24 hours

Unacceptable Conditions

Plasma specimens not separated within 24 hours of collection time; Heparinized specimens

Notes

If Hepatitis C Virus by Quantitative NAAT result is greater than or equal to 4,000 IU/mL, then Hepatitis C Virus Genotype by Sequencing will be added. Additional charges apply.

Processing - HUP

Centrifuge samples at 1000xg for 10 minutes; aliquot into a secondary container

Processing - PAH

Send to HUP Central

Processing - Presbyterian

Send to HUP Central

Processing - HUP Cedar

Send to HUP Central

Reference Interval

Components Reference Interval
HCV Qnt by NAAT Interp Not Detected

Interpretive Data

Genotypes are reported as: 1a, 1b, 2, 2b, 2a/c, 3, 4, 5, 6. The following mixed infections will be reported: 1a/1b, 1a/2b, 1/2, 1b/2b, 1a/3, 1b/3, 1a/2a/c, 1/2a/c, 1b,2a/c, 1/4. Samples with a viral load less than 1000 IU/mL may not be able to be genotyped. Sequence heterogeneity of the HCV genome, mixed infections, or cross contamination can cause the HCV genotype to be unidentifiable. The ability to detect a mixed infection is dependent on the relative viral loads of the mixed genotypes present.
 

Clinical Significance

HCV is a heterogeneous virus that is classified by phylogenetic analysis into six genotypes, each with 1 or more subtypes; a seventh genotype was recently established, which is very rare and not expected to be encountered in clinical practice. Genotype 1 is the most prevalent in the U.S. population accounting for approximately three-fourths of isolates found. Historically, Genotype 2 and 3 infections have had better response relative to other genotypes to standard HCV treatment regimens based on pegylated interferon and ribavirin therapy. However, the development of new, direct-acting, anti-viral agents targeting the viral replication complex have resulted in significant response to treatment across all genotypes.  Currently, however, treatment protocol and duration recommendations are still based on genotype information.

CPT Codes

87522; if reflexed, add 87902

LOINC

  • 11011-4
  • 38180-6
  • 11259-9

ARUP Test Code

3000576
Collection & Processing

Other Related Information

HCV Quant with Reflex to HCV Genotype

Additional Tests Included

Includes required HCV Quantitative Viral Load

Ordering Recommendations

HCV GENO is an order that includes both required HCV Quantification and HCV Genotyping. Order only HCV GENO. DO NOT order an additional HCV QNT.

Collection Container

Pearl top (SST), or other ARUP suggested tubes: Lavender (EDTA), pink (K2EDTA), plasma preparation tube (PPT), or serum separator tube (SST).

Collect

5 ml of blood in K2EDTA pearl white top tube

Pediatric Collection

Approval required from Molecular Pathologist for Pediatric Testing; contact the Molecular Laboratory at 215-615-3094 to arrange testing.

Specimen Preparation

Send specimen to lab within 24 hours of collection.  Do not spin.

Storage/Transport Temperature

Room temperature or refrigerated

Stability (from collection to initiation)

Stable at room temperature for 24 hours

Unacceptable Conditions

Plasma specimens not separated within 24 hours of collection time; Heparinized specimens

Notes

If Hepatitis C Virus by Quantitative NAAT result is greater than or equal to 4,000 IU/mL, then Hepatitis C Virus Genotype by Sequencing will be added. Additional charges apply.
CR&P Information

Processing - HUP

Centrifuge samples at 1000xg for 10 minutes; aliquot into a secondary container

Processing - PAH

Send to HUP Central

Processing - Presbyterian

Send to HUP Central

Processing - HUP Cedar

Send to HUP Central
Result Interpretation

Reference Interval

Components Reference Interval
HCV Qnt by NAAT Interp Not Detected

Interpretive Data

Genotypes are reported as: 1a, 1b, 2, 2b, 2a/c, 3, 4, 5, 6. The following mixed infections will be reported: 1a/1b, 1a/2b, 1/2, 1b/2b, 1a/3, 1b/3, 1a/2a/c, 1/2a/c, 1b,2a/c, 1/4. Samples with a viral load less than 1000 IU/mL may not be able to be genotyped. Sequence heterogeneity of the HCV genome, mixed infections, or cross contamination can cause the HCV genotype to be unidentifiable. The ability to detect a mixed infection is dependent on the relative viral loads of the mixed genotypes present.
 

Clinical Significance

HCV is a heterogeneous virus that is classified by phylogenetic analysis into six genotypes, each with 1 or more subtypes; a seventh genotype was recently established, which is very rare and not expected to be encountered in clinical practice. Genotype 1 is the most prevalent in the U.S. population accounting for approximately three-fourths of isolates found. Historically, Genotype 2 and 3 infections have had better response relative to other genotypes to standard HCV treatment regimens based on pegylated interferon and ribavirin therapy. However, the development of new, direct-acting, anti-viral agents targeting the viral replication complex have resulted in significant response to treatment across all genotypes.  Currently, however, treatment protocol and duration recommendations are still based on genotype information.

Billing Codes

CPT Codes

87522; if reflexed, add 87902

LOINC

  • 11011-4
  • 38180-6
  • 11259-9

ARUP Test Code

3000576

Ordering Information

Cerner Orderable
HCV Quant with Reflex to HCV Genotype
ARUP (HCVRFLX or HCVRFLX-ARUP)
Penn Chart Orderable
Hepatitis C Virus Genotype (Includes required HCV Quantitative Viral Load and HCV Genotyping); C3510166
Performing Lab
ARUP
Performed
Sun - Sat
Reported
1-8 days
Methodology
Quantitative Polymerase Chain Reaction (PCR)/Sequencing
Synonyms
  • HCV GENOTYPE
  • Hepatitis C Genotype
  • HCVG
  • HCVGeno

ARUP Consult®

Disease Topics